PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu050337.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 155aa MW: 16924.4 Da PI: 9.674

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu050337.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.3	3.6e-05	40	72	17	54
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++++ L++l+ + +K + a++L +A+eYI+ L Oeu050337.1 40 GERISALQQLVSPY-----GKTDTASVLLEAMEYIRFL 72 57899999999998.....9****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MMEHKRNSVS LDQSSLMGLK KKIQKIDAPL SSKEKKEKVG ERISALQQLV SPYGKTDTAS 60 VLLEAMEYIR FLHEQVKVLS APYLSSTPTT NTQVSIKLEV EQHNLKSKGL CLVPISFTDG 120 VASSNGADIW APIKSSSPNS RRSISDDVSV ITYS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05710.3	5e-54	bHLH family protein