PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050439.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 265aa    MW: 30593.5 Da    PI: 9.1148
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050439.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.63.3e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +lv+ +   G ++W+ +++  g+ R++k+c++rw +yl
      Oeu050439.1 14 RGPWTIEEDHKLVNFILNNGIRCWRMVPKLAGLLRCGKSCRLRWINYL 61
                     89******************************99************97 PP
2Myb_DNA-binding52.51.2e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ ++ E+ ++++++++lG++ W++Ia++++ gRt++++k++w++
      Oeu050439.1  67 RGALSEMEENRIIELHARLGNK-WSKIASHFP-GRTDNEIKNYWNT 110
                      78889*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MGRQPFCDRV GLKRGPWTIE EDHKLVNFIL NNGIRCWRMV PKLAGLLRCG KSCRLRWINY  60
LRPDFKRGAL SEMEENRIIE LHARLGNKWS KIASHFPGRT DNEIKNYWNT RIKKRLSLLG  120
IDHVTHKPIE QKEKSKRKTV NSNNSQNGQE NHVNVDQTTG SEGPKEGRIN EDETSNLVSN  180
YEILYGNLNM ANCYSPSSLS LEYSVNPSTS IQDDVVIAQS YFDSVDSVMS WNSFNQLDDR  240
DFSFQKCKYY ALGPINFGHK YFYI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.13e-78MYB family protein