PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu050488.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 391aa MW: 41251 Da PI: 6.5113

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu050488.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.2e-12	218	263	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq Oeu050488.1 218 HSIAERLRRERITERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 263 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MNVNSLLNLP EIPNHQNGET HFDPTSSHED FLEQMLSSTS SFPWEFSAAA EPSQTDDQSP 60 QSNMLSHFDD QSELLASKLR HHQIGDGAAA AKSLMFQQQL VSRGLAGNGL RSPAGTESGL 120 LPVPSSHNGH HDVVNGSSKS ANLANEALYN GFIESLGQSL NQPPFFHHPQ GEAIQAQNFG 180 APAAMAAAMN HPAGSGGGPP PQPKQRVRAR RGQATDPHSI AERLRRERIT ERMKALQELV 240 PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRMGNAAGV IPRVADISSE GSSKGNNSDG 300 MKTTEQQVAK LLEEDMGSAM QYLQGKGLCL MPISLASAVS TTTCHSRNPM AGGPSSPSMS 360 VLTVQSAAAG GNGGGEASVK DIATSVTSKP *

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MNVNSLLNLP EIPNHQNGET HFDPTSSHED FLEQMLSSTS SFPWEFSAAA EPSQTDDQSP  60
QSNMLSHFDD QSELLASKLR HHQIGDGAAA AKSLMFQQQL VSRGLAGNGL RSPAGTESGL  120
LPVPSSHNGH HDVVNGSSKS ANLANEALYN GFIESLGQSL NQPPFFHHPQ GEAIQAQNFG  180
APAAMAAAMN HPAGSGGGPP PQPKQRVRAR RGQATDPHSI AERLRRERIT ERMKALQELV  240
PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRMGNAAGV IPRVADISSE GSSKGNNSDG  300
MKTTEQQVAK LLEEDMGSAM QYLQGKGLCL MPISLASAVS TTTCHSRNPM AGGPSSPSMS  360
VLTVQSAAAG GNGGGEASVK DIATSVTSKP *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	228	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	4e-74	bHLH family protein