PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050578.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 168aa    MW: 19504.5 Da    PI: 8.4355
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050578.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.6e-051958454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 ++ e+Err R+++N+++ eLr+l+ ka           +i + Av YI +L
  Oeu050578.1 19 KNLEAERRLRKKLNDRLLELRSLMNKA-----------TIMTDAVTYIEQL 58
                 56799*****************98555...........8888888888888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MGKKKHIDSD DEDDKYKSKN LEAERRLRKK LNDRLLELRS LMNKATIMTD AVTYIEQLRR  60
HVKDLSNQLL KMDTTFVKEE ETTKIEEIDS AEEMTIWGIE PQVQGTSIDG TKVWIKIVYQ  120
KTKGRFTKIM EAMSVLGFDL TVSMSPRPKE QFLFSSCVEV KFDSFNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-14bHLH family protein