PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050604.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 851aa    MW: 93289.6 Da    PI: 6.5046
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050604.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox581.6e-182280357
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Oeu050604.1 22 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsHIEPKQIKVWFQNRRCREKQ 80
                 5679*****************************************************97 PP
2START170.79.4e-541673752205
                  HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEX CS
        START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvae 97 
                  +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+ ++ W ++++++++l+v+ +   g+++l +++
  Oeu050604.1 167 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKERPSWFRDCRAVDVLNVLPTVngGTIELLYMQ 263
                  789*******************************************************.7777777777***************98666********* PP

                  XTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHH CS
        START  98 lqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglae 191
                  l+a+++l+p Rdf+ +Ry+  + +g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h++l+ ++++++lr+l++s+++ 
  Oeu050604.1 264 LYAPTTLAPgRDFWLLRYTSVMDDGSLVVCERSLSNTQNGPSmppVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSTML 361
                  ****************************************9988899*************************************************** PP

                  HHHHHHHHTXXXXX CS
        START 192 gaktwvatlqrqce 205
                  + kt+ a+l+++++
  Oeu050604.1 362 AHKTTIAALRQLRQ 375
                  *********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 851 aa     Download sequence    
MAMSCKDANK AAAAAAAMDN GKYVRYTPEQ VEALERLYHE CPKPSSIRRQ QLIRECPILS  60
HIEPKQIKVW FQNRRCREKQ RKESSRLQSV NRKLTAMNKL LMEENDRLQK QVSQLVYENG  120
YFRQHTQNNA LATKDTSCES VVTSGQQHRL TPQHPPRDAS PAGLLSIAEE TLTEFLSKAT  180
GTAVEWVQMP GMKPGPDSIG IVAISHGCTG VAARACGLVG LEPTRVAEIL KERPSWFRDC  240
RAVDVLNVLP TVNGGTIELL YMQLYAPTTL APGRDFWLLR YTSVMDDGSL VVCERSLSNT  300
QNGPSMPPVQ NFVRAEMLPS GYLIRPCEGG GSIIHIVDHM NLEPWSVPEV LRPLYESSTM  360
LAHKTTIAAL RQLRQIAQDV SQSSVTNWGR RPAALRALSH RLSRGFNEAL NGFSDDGWSL  420
MGNDGMDDVT IVVNSNPEKL MGLNLSFTNG YPSVSNAVLC AKASMLLQNV PPAILLRFLR  480
EHRSEWADNN VDAYSATAVK VGPCTFLGSQ IGSFGGQVIL PLAQTIEHGE ASNLNFLLEV  540
IKLEGVGHSP EDAMLPRDVF LLQLCSGIDE NAVGTCAELI FAPIDASFAD DAPLLPSGFR  600
IIPLDSGKES PSPNRTLDLA SALEIGTAGN RSSNDLAVTS GTTRSVMTIA FEFAFESHMQ  660
DHVASIARQY VRGIISSVQR VALALSPSHL GLQASIRSPL GTPEAHTLSR WICQSYRSYM  720
GVDLLKSAGE GSESILKALW NHSDAIICCS IKAMSVFTFA NQAGLDMLET TLVALQDISL  780
EKIFDDHGRK NLCSEFPQIM QQGFACLQSG ICLSSMGRPV SYERAIAWKV LNEDDNAHCI  840
CFMFVNWSFV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein