PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050606.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 345aa    MW: 37333.6 Da    PI: 6.9408
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050606.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA529.7e-17233267135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  Oeu050606.1 233 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 267
                  99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEYFMGDYAE FSSVDNINLN SNGNGAHFTV DDLLDFSKED VAMTDAFFDS LAGNSGESSA  60
VTAVDSCNSS LSDGGDGLLN GHVSCRSFIG SQFSGHELCV PCDDLAELEW LSKFVEESFS  120
SDDVHNLHFI PAEPTAASSS SSATKISVSP INHSPPPPPI FPSHVPVPGK ARSKRSRAAP  180
CDWSSRLLLS SPPSSTSNNH YGNATINANP NHKPMKTPPS KKRGPTETPG RKCLHCASEK  240
TPQWRTGPMG PKTLCNACGV RYKSGRLVPE YRPAASPTFV STKHSNSHRK VVELLRQKEL  300
QMQLQQQHQG QLLSQTSIFN INGCDDFLIH RHNGADGPDF KHVI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-58GATA family protein