PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu050882.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 357aa MW: 40516.5 Da PI: 4.661

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu050882.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.6	1.4e-10	284	324	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rrRR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Oeu050882.1 284 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 324 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MEPVGTFFDE EWESLSRMFS SEESDLTLHL HGSELFSNQV VNGLCSELPS NFLDNTEENV 60 AAGIDDTVSF TFDHTLDTTN FHYLSQENRN SSTEIGKLFF PNQENAVNFP DQLTRFCMTD 120 CKNDQNFPVS FPEDHVVEDI LFIKEDMDSG QMGKAKSQPA EIGDSVKEMQ FKRKSDTPEE 180 TLDENYPNKK SRVSRDASRN KRWIAQRKRK KNVNQNSTDE LEENNGGENG KSSSSYCYED 240 DCNGSQELNG RENSESKGSA TVKSNGKARA SRGSATDPQS LYARRRRERI NERLRILQNL 300 VPNGTKVDIS TMLEEAVHYV KFLQLQIKLL SSDDMWMYAS IAYNGMGIGI YENHSY*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MEPVGTFFDE EWESLSRMFS SEESDLTLHL HGSELFSNQV VNGLCSELPS NFLDNTEENV  60
AAGIDDTVSF TFDHTLDTTN FHYLSQENRN SSTEIGKLFF PNQENAVNFP DQLTRFCMTD  120
CKNDQNFPVS FPEDHVVEDI LFIKEDMDSG QMGKAKSQPA EIGDSVKEMQ FKRKSDTPEE  180
TLDENYPNKK SRVSRDASRN KRWIAQRKRK KNVNQNSTDE LEENNGGENG KSSSSYCYED  240
DCNGSQELNG RENSESKGSA TVKSNGKARA SRGSATDPQS LYARRRRERI NERLRILQNL  300
VPNGTKVDIS TMLEEAVHYV KFLQLQIKLL SSDDMWMYAS IAYNGMGIGI YENHSY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	211	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33880.1	1e-41	bHLH family protein