PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050990.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 127aa    MW: 15045.2 Da    PI: 9.9129
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050990.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.4e-161057148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l +++ ++G g W+ ++ + g++++ k+c++rw++yl
      Oeu050990.1 10 KGSWTEEEDNILSKCIDKFGEGKWHQVPVRAGLNKCKKSCRLRWLNYL 57
                     799********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MVSTPVEVRK GSWTEEEDNI LSKCIDKFGE GKWHQVPVRA GLNKCKKSCR LRWLNYLRPN  60
IKRGDFTPDE DDLIIRLHKL WSLISGRLPE SIANDVKNHW NSHVQKCWRK DEYTNLDWLR  120
FLRGQR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.17e-49MYB family protein