PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051090.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 187aa    MW: 21504.3 Da    PI: 8.0698
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051090.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.32.3e-171974257
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
     Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                  k+ ++++ q++ Le+ F  +++++ e++ +LA++lg++ rq+ +W+qN+Ra++k+
  Oeu051090.1 19 HKKKRLNEGQVRLLEASFDAEKKLDPERKFHLAHELGVPPRQIAIWYQNKRARWKN 74
                 5677899***********************************************95 PP
2HD-ZIP_I/II110.31.3e-3520111293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  kk+rl++ qv+lLE sF++e+kL+perK +la+eLg+ prq+a+W+qn+RAR+k++ lE+dy++L+ ++++  +e+++Leke ++Lr elk+
  Oeu051090.1  20 KKKRLNEGQVRLLEASFDAEKKLDPERKFHLAHELGVPPRQIAIWYQNKRARWKNQSLEVDYSSLQMRLETALSEKKQLEKEIDNLRGELKR 111
                  9**************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MNVFNSQNQK QNHSSSSKHK KKRLNEGQVR LLEASFDAEK KLDPERKFHL AHELGVPPRQ  60
IAIWYQNKRA RWKNQSLEVD YSSLQMRLET ALSEKKQLEK EIDNLRGELK RTQDMLLASQ  120
GCPPPVSSFS SYCDEGSSTF NDDGRRSLEI VDQTLQLQEL YACLMMGEKE QTVLSPTGLN  180
QKDFWV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.15e-32HD-ZIP family protein