PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu051103.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 416aa MW: 45007.5 Da PI: 6.975

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu051103.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.9	3.7e-34	24	129	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec...eaesssssasnsss 87 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++a++ai+ l ++ s + + ++++++ a+n+++ Oeu051103.1 24 TGRKDRHSKVCTSKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAQAAIDGLEQLpawkpttgsSVD----AsfeQEDAQKLFAENHRQ 117 79**************************************************************666553322111....112112222222221111 PP TCP 88 g..........k 89 + + Oeu051103.1 118 HhlgtniagpsS 129 134444444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MSSRLRNTGG EIVEVQGGHI IRSTGRKDRH SKVCTSKGPR DRRVRLAAHT AIQFYDVQDR 60 LGYDRPSKAV DWLIKKAQAA IDGLEQLPAW KPTTGSSVDA SFEQEDAQKL FAENHRQHHL 120 GTNIAGPSSK RAMTMLGSES EQQGLHQRGN VNPNPSFLPP SLDSDAIADT IKSFFPMGAS 180 AESSSSAMQF QSFGTSDLLS RPNNQSQDLR LSLHSLEDPI LLHHHNQQQP QEHQNPIHHN 240 EQTHVQSQAQ VLLSGTPLGF DGTAGWSGQH QQMSEITWFQ RFAAWNAGGD AGTGSGGAAG 300 YLFNSPSVPQ PLLQQLLGQN QFLSQRGPLQ SSNSPSVRAW MDPSAIAIAT ADHSQQQQSH 360 PAVLPIYPSS LPGIGFASGV GGFSGFNIPA RIRGDEEEHD GYSDKPSSAS SNSRH*

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MSSRLRNTGG EIVEVQGGHI IRSTGRKDRH SKVCTSKGPR DRRVRLAAHT AIQFYDVQDR  60
LGYDRPSKAV DWLIKKAQAA IDGLEQLPAW KPTTGSSVDA SFEQEDAQKL FAENHRQHHL  120
GTNIAGPSSK RAMTMLGSES EQQGLHQRGN VNPNPSFLPP SLDSDAIADT IKSFFPMGAS  180
AESSSSAMQF QSFGTSDLLS RPNNQSQDLR LSLHSLEDPI LLHHHNQQQP QEHQNPIHHN  240
EQTHVQSQAQ VLLSGTPLGF DGTAGWSGQH QQMSEITWFQ RFAAWNAGGD AGTGSGGAAG  300
YLFNSPSVPQ PLLQQLLGQN QFLSQRGPLQ SSNSPSVRAW MDPSAIAIAT ADHSQQQQSH  360
PAVLPIYPSS LPGIGFASGV GGFSGFNIPA RIRGDEEEHD GYSDKPSSAS SNSRH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-76	TCP family protein