PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051193.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 149aa    MW: 16647.4 Da    PI: 10.9193
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051193.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF62.26e-201562249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 r + +sn  vtfskRr g++K A+EL++LCda++a+i+fs+  k++ +
  Oeu051193.1 15 RMSKESNLLVTFSKRRSGLFKEASELCTLCDAKIAIIVFSPGKKVFSF 62
                 567889999********************************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MTRKSRGRQK IAMTRMSKES NLLVTFSKRR SGLFKEASEL CTLCDAKIAI IVFSPGKKVF  60
SFGHPCVESI VDRYTMRNGT PSSSTMQLME AHRNASVREL NMQLTNMLSQ LEAEKKCSEE  120
LSKVRRASQG SAGGRHPLMI FAWKSLNN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.18e-53M-type_MADS family protein