PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu051240.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 414aa MW: 45717.1 Da PI: 8.4558

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu051240.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.9	0.00021	312	349	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L+++ eYIk L Oeu051240.1 312 RKEKLGDRITVLQQLVSPF-----GKTDTASVLQETLEYIKFL 349 6678889999999999998.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MAEEYFQGEV CGGNWWNSSR NIFGSSLCSS NINEIANFGW PNDMIMNMNT RSNDDSGSPS 60 DGSIVLQDVR KPQQTDSEFI ANGNIPIGSI LQMMENESPS STPDNWNRDL FHENGRLSQG 120 NCVHILQENL ASSMNYLQQT GINCPHIQKD WNSKNRGLDS SIYSSSLLNS LFDTDSQPHN 180 SSLNNRVMNY QSPTSYLKKY SNEFAPPLPQ LSPLIKVSLP NKKPAKHLQF SNNIPSLNAK 240 VASLNDIRAS LPTSTQSQFP SSNINSKPNL LKGVNKETRG LSSVAKKSSS EHALKRPRIE 300 TPSPSPPTFK VRKEKLGDRI TVLQQLVSPF GKTDTASVLQ ETLEYIKFLH DQVSVLSTSY 360 MKNGSFVERQ QAADKQDLKS RGLCLVPISG TFPVAAETAT DFWTPTFGGT FRG*

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MAEEYFQGEV CGGNWWNSSR NIFGSSLCSS NINEIANFGW PNDMIMNMNT RSNDDSGSPS  60
DGSIVLQDVR KPQQTDSEFI ANGNIPIGSI LQMMENESPS STPDNWNRDL FHENGRLSQG  120
NCVHILQENL ASSMNYLQQT GINCPHIQKD WNSKNRGLDS SIYSSSLLNS LFDTDSQPHN  180
SSLNNRVMNY QSPTSYLKKY SNEFAPPLPQ LSPLIKVSLP NKKPAKHLQF SNNIPSLNAK  240
VASLNDIRAS LPTSTQSQFP SSNINSKPNL LKGVNKETRG LSSVAKKSSS EHALKRPRIE  300
TPSPSPPTFK VRKEKLGDRI TVLQQLVSPF GKTDTASVLQ ETLEYIKFLH DQVSVLSTSY  360
MKNGSFVERQ QAADKQDLKS RGLCLVPISG TFPVAAETAT DFWTPTFGGT FRG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	2e-49	bHLH family protein