PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051267.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 543aa    MW: 60417.9 Da    PI: 5.983
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051267.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix99.42.9e-3150133186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rW++qe+laL+++r++m+ ++r+++lk+plWeevs+km+e g++r+pk+Ckek+en+ k++k++keg++++  ++ +t+++fdql+
  Oeu051267.1  50 RWPRQETLALLKIRSDMDVAFRDSSLKGPLWEEVSRKMAELGYQRNPKKCKEKFENVYKYHKRTKEGRSSK--PDDKTYRFFDQLQ 133
                  8********************************************************************95..66679******98 PP
2trihelix104.38.7e-33382467187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW+k ev aLi++r++++ +++++  k++lWee+s++m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  Oeu051267.1 382 RWPKAEVEALIKFRTDLDLKYQENGPKGTLWEEISSVMAKIGYNRSAKRCKEKWENMNKYFKKVKESNKKR-PEDSKTCPYFEQLDA 467
                  8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MLGDSSGGAA AVKGNDSGGE VGLGSGDFVE EDKLGIDEGE RSCGGGGGNR WPRQETLALL  60
KIRSDMDVAF RDSSLKGPLW EEVSRKMAEL GYQRNPKKCK EKFENVYKYH KRTKEGRSSK  120
PDDKTYRFFD QLQALEHNPP PLLAPPLQVV AVPPPLVTIN PPFAAHVSPL STAPQGTNTP  180
MNLSSQISQP PTMHTTNPPQ AHTFPPSCSK ISTSHLSIST SSSTSSDEDI QRRYRKKQKW  240
VGYFERLMKD VTEKQEEMQE KFLETLEKRE MDRIAREEAW RVQEMTKMNK EHELLVQERS  300
IAAAKDSAVI AFLQKITGQQ NLQIPMVQVP HNPSPPLAPP QQSPAPPAPP PVPSTAEATP  360
VRIDTPKTDS GGESFILASS SRWPKAEVEA LIKFRTDLDL KYQENGPKGT LWEEISSVMA  420
KIGYNRSAKR CKEKWENMNK YFKKVKESNK KRPEDSKTCP YFEQLDAIYK EKAKNESSSI  480
DPGYNISKPE NPVVPLMAVP EQQWSLPLQA EPQQESALDE DGDDGDEDEG GGCEIVTNKQ  540
QS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-139Trihelix family protein