PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu051333.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 340aa MW: 38916.4 Da PI: 5.8549

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu051333.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.8e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d ++++G g+W+ ++ g+ R++k+c++ w +yl Oeu051333.1 14 KGPWTPEEDQKLIDFIQKHGYGNWRNLPKSAGLQRCGKNCRLCWANYL 61 79******************************************9997 PP
2	Myb_DNA-binding	25	4.4e-08	67	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ +k +Rt++++k++w+++ Oeu051333.1 67 RGRFSFEEEETIIQLHSILGNK-FKF-------RRTDNEIKNYWNTH 105 89******************.999.......8*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLIDFIQ KHGYGNWRNL PKSAGLQRCG KNCRLCWANY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKFK FRRTDNEIKN YWNTHIRKRL LRMEIDPVTH 120 SPRLDLLDLS TVLNSSLHNA SHFNFSRLLG MQNIINPDLL RLATSISSFQ SQNQGFPLQK 180 NVQENQIFND QVQNQMPSLV QPCQLLQTPV QDDQSQLMMQ SDSENFPQNV SLNEWQSSGF 240 LTEDYVPTVT NYDYYGPSNQ PIIIDPPPSD DQTSTFQSNI CNTFSFQSIL SNISTPSSSP 300 TPNSTYINSS STSHGDERES YGSNMLNFDM DVNEFMQLH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	2e-91	MYB family protein