PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051414.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 207aa    MW: 23087.9 Da    PI: 9.1393
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051414.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.11.2e-23959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 ++ie+  nr++tf kRr+g+lKKA+ L vLC+aevaviifs+ gkl+e+ss
  Oeu051414.2  9 EKIEDVNNREITFRKRRTGLLKKAHKLAVLCEAEVAVIIFSNAGKLFEFSS 59
                 579**********************************************96 PP
2K-box50.49.8e-18891571987
        K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                  +e++ Lk ei +L ++q ++lG+dL+ +s++eL  LeqqL+++l  i+++K++ll +q+ ++++  ++l
  Oeu051414.2  89 KEVDLLKLEIPKLTTKQMKFLGKDLTGMSVQELGALEQQLNEGLLCIKERKEQLLQQQLAHSKMLVEKL 157
                  799************************************************************998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MGRGKIEIEK IEDVNNREIT FRKRRTGLLK KAHKLAVLCE AEVAVIIFSN AGKLFEFSSS  60
DMKRTLSRYN KCQGPFEVPV PAFKPEEPKE VDLLKLEIPK LTTKQMKFLG KDLTGMSVQE  120
LGALEQQLNE GLLCIKERKE QLLQQQLAHS KMLVEKLKGF FPSIEHLAPL VLKNSPVEKN  180
NYGSIGGGLD DDVSNTTLTL GYFAPA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.16e-50MIKC_MADS family protein