PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051444.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 257aa    MW: 30046.9 Da    PI: 9.2083
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051444.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.88.9e-171057148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l+ +v+++G ++W+ Ia+  g++Rt+k+c++rw +yl
      Oeu051444.1 10 KGPWTEEEDYQLALYVNLFGERRWDFIAKVSGLKRTGKSCRLRWVNYL 57
                     79********************************************97 PP
2Myb_DNA-binding55.31.5e-1763108148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+ l v+++ ++G++ W++Ia++++ gRt++++k++w++y+
      Oeu051444.1  63 RGKMTPHEQRLVVQLHSKWGNR-WSKIAQKLP-GRTDNEIKNYWRTYM 108
                      89********************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MVQKEEVMRK GPWTEEEDYQ LALYVNLFGE RRWDFIAKVS GLKRTGKSCR LRWVNYLNPA  60
LKRGKMTPHE QRLVVQLHSK WGNRWSKIAQ KLPGRTDNEI KNYWRTYMRK SAQERQKSAV  120
SPSSSSSSSK SSSSCTIITE IKEPSFYDTG GLNVVASTEK NFKALSSTSE TDRPISRRIE  180
SKNVQEKEEN TKFYSMEEIW KDVEFSDENY NFPSQTMASP IWDYCPNFLW PMDEEVNKMF  240
LPMSYQFHSF NQEMTG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.18e-70MYB family protein