PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu051770.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 389aa MW: 43341.9 Da PI: 8.649

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu051770.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.7	6.8e-11	146	192	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + h ++Er+RR+++ + f L +++P + kKl+Ka+ L+ A++Y+++L Oeu051770.1 146 QDHLMAERKRREKLSQLFIDLSKVVPGL-----KKLDKASLLQDATKYVQEL 192 56999*********************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEIDEGLVNS KGEANLDEFC DLEPILDEIL SYDQQLFTPI DALNSPAKQP SNYTSWSSYI 60 NGPQEIISKA SSSSSSSQLI SFGIPKQTDE KLLRILPRDS SISSKVIKFS SLPTEDTSGK 120 NKLYDAAHEM GDKRVWTMIR SPLQAQDHLM AERKRREKLS QLFIDLSKVV PGLKKLDKAS 180 LLQDATKYVQ ELRERVRILE EEAEEANKNS ISNSNYANYP TIINDDTSSS SRESSNYCST 240 RESAPAEISA RISNKNVLIK ICTKKQKGLI SRIQYEMEKL YLNVLDIRAL PFGSSTVEIT 300 ILAENNTSQS KSHIQNQQWS NGGSDLTNQG NKVTTHAIGP KNLTKIMKKL AMEPTKKRSK 360 EQQNNGGRNR NQGTNVGCQV LGLVTQMC*

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEIDEGLVNS KGEANLDEFC DLEPILDEIL SYDQQLFTPI DALNSPAKQP SNYTSWSSYI  60
NGPQEIISKA SSSSSSSQLI SFGIPKQTDE KLLRILPRDS SISSKVIKFS SLPTEDTSGK  120
NKLYDAAHEM GDKRVWTMIR SPLQAQDHLM AERKRREKLS QLFIDLSKVV PGLKKLDKAS  180
LLQDATKYVQ ELRERVRILE EEAEEANKNS ISNSNYANYP TIINDDTSSS SRESSNYCST  240
RESAPAEISA RISNKNVLIK ICTKKQKGLI SRIQYEMEKL YLNVLDIRAL PFGSSTVEIT  300
ILAENNTSQS KSHIQNQQWS NGGSDLTNQG NKVTTHAIGP KNLTKIMKKL AMEPTKKRSK  360
EQQNNGGRNR NQGTNVGCQV LGLVTQMC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	157	ERKRRE
2	153	158	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22750.1	1e-29	bHLH family protein