PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu051778.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 179aa MW: 20361.9 Da PI: 9.7981

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu051778.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	80.6	1.1e-25	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ v ifss+gk+ye + Oeu051778.1 9 KRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVFIFSSHGKFYELA 58 79*********************************************965 PP
2	K-box	62.3	1.8e-21	81	173	7	99
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ +++a l+ e++ Lk +i+ Lq+ +R + G + + ++l eL+ Le++Le + +iRs+K+++++++ie l++ke+ l+ +n+ L++k++ Oeu051778.1 81 EQPRDKQALDLKGEISLLKHKIDGLQKGLRFISGGGTGAMTLDELNDLEKHLEVCVYQIRSTKMDIMFQEIELLKNKERILKAANEHLQEKVK 173 445677888999******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MARGKIQMKR IENPVHRQVT FCKRRTGLLK KAKELSVLCD AEIGVFIFSS HGKFYELATK 60 GTMQGLIERY MKCNPLGAQT EQPRDKQALD LKGEISLLKH KIDGLQKGLR FISGGGTGAM 120 TLDELNDLEK HLEVCVYQIR STKMDIMFQE IELLKNKERI LKAANEHLQE KVKYDIII*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71692.1	9e-68	MIKC_MADS family protein