PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052106.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 534aa MW: 58410 Da PI: 7.0084

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052106.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.7	6.5e-16	328	374	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq Oeu052106.1 328 VHNQSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 374 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MNHRVPDFER EEDYSIPTSS GLSGPRKSAL GEEEIMELLW QNGPVVVQSQ NQRSTRKAQF 60 GGGSGGEALI PTEVREIRSS GEEQTAAAKN LFIQEDEMTS WLQYPLDDSS FDRDLYADLL 120 YSTPPPPPPA PVTKVAPPRA AAEIRPPPMP TRPPIPTPPR KLRASSALQN FVHLSRMSRA 180 RNETISGPSS SSKAAVREST VVESNETPMV GSKYRVSQAA AKSTAQDFGR NILRGTATAC 240 TTAARESETG TCDLTLISSP GGSGASVSAS PEPPPPHQNP PPAEDQKRKG REAEENDYRN 300 EDIEFESAEA KMHARSSTST KRSRAAEVHN QSERRRRDRI NEKMRALQEL IPRCNKSDKA 360 SMLDEAIEYL KSLQLQVQMM SMGCGMMPMM YPGVQQFMPA MGMGMGMGMG MGMGMEMGMN 420 RPMVPYQSVL PSSPMPNPSA AAHMGPRFSM PPFHMSPVPV PEPSRIQVSN QTDPVLNLHV 480 ANNPNQPQIP NFMDPYQQYL CLHQAQFPLP QNQAAVPPPI TNKPSSSKEM GNT*

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MNHRVPDFER EEDYSIPTSS GLSGPRKSAL GEEEIMELLW QNGPVVVQSQ NQRSTRKAQF  60
GGGSGGEALI PTEVREIRSS GEEQTAAAKN LFIQEDEMTS WLQYPLDDSS FDRDLYADLL  120
YSTPPPPPPA PVTKVAPPRA AAEIRPPPMP TRPPIPTPPR KLRASSALQN FVHLSRMSRA  180
RNETISGPSS SSKAAVREST VVESNETPMV GSKYRVSQAA AKSTAQDFGR NILRGTATAC  240
TTAARESETG TCDLTLISSP GGSGASVSAS PEPPPPHQNP PPAEDQKRKG REAEENDYRN  300
EDIEFESAEA KMHARSSTST KRSRAAEVHN QSERRRRDRI NEKMRALQEL IPRCNKSDKA  360
SMLDEAIEYL KSLQLQVQMM SMGCGMMPMM YPGVQQFMPA MGMGMGMGMG MGMGMEMGMN  420
RPMVPYQSVL PSSPMPNPSA AAHMGPRFSM PPFHMSPVPV PEPSRIQVSN QTDPVLNLHV  480
ANNPNQPQIP NFMDPYQQYL CLHQAQFPLP QNQAAVPPPI TNKPSSSKEM GNT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	333	338	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	2e-58	bHLH family protein