PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052267.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 117aa    MW: 13409.5 Da    PI: 10.1695
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052267.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.26e-152369349
                 --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 i+ k+     +skRr+g++KKA E   LC ++va++i s+ +k++++
  Oeu052267.1 23 IDKKTSLRGALSKRRKGLFKKAMETHLLCSTDVAILIQSPGNKFFTF 69
                 77777777889***********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MTTSNGIPEK ETKGKRKIEI QKIDKKTSLR GALSKRRKGL FKKAMETHLL CSTDVAILIQ  60
SPGNKFFTFG EPSLKSILPQ CQFLDDAHNP MVEGRGKNER EFWWEKENLE KMELRD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-18M-type_MADS family protein