PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052268.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 196aa    MW: 22791.9 Da    PI: 6.5526
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052268.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF56.73.1e-182067249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 +i+ k+  qv+fskRr+g++KKA E   LC+++va++i s+ +k++++
  Oeu052268.2 20 KIDKKTSLQVSFSKRRKGLFKKAAETRLLCGTDVAIVIQSPGNKFFTF 67
                 69999******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MSNGITEKKT KGRRKIEIQK IDKKTSLQVS FSKRRKGLFK KAAETRLLCG TDVAIVIQSP  60
GNKFFTFGEP SVESILNRWQ FVDDAHNPVV EEMGKSEREF WWVNENLERM ELRELGSFEE  120
ILTRLRDDVN ENLERMELRE LGAFEEILTG LRDEVSNRAS HNPVVEEMGK TEREFCGSMK  180
TWKEWNCANS ECLRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-24M-type_MADS family protein