PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052384.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 234aa    MW: 26326.5 Da    PI: 6.6792
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052384.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.4e-05177217954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  E + R+++++    Lr ++P a       +s +++L +Av+Y+ksL
  Oeu052384.1 177 EDKKRQKMRKMVKALRGIVPGA-----NQMSTVAVLDEAVRYLKSL 217
                  556699***************8.....58***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MHSDGKYFPQ NPVLPLPNQV GSYYMSKAHI QSIFGGTILP SGIKPSRPFH VVDFLTSDAC  60
PRNFVIFDKT KNRSQIMFHP EIGSKYPHPD YGVGMSNCLD NIGWKDKEDR EITSFTEDSY  120
DIDALLSTEY ENEEYDEDKL STGRTDANYG SESLDSCSNY ESLSRKRRSP PSEKSSEDKK  180
RQKMRKMVKA LRGIVPGANQ MSTVAVLDEA VRYLKSLRVE VQETGVGNLT KYA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164169SRKRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.19e-27bHLH family protein