PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052559.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 274aa MW: 31005.9 Da PI: 5.1749

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052559.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.2	1e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l +v ++G +W++ +++ g+ R++k+c++rw +yl Oeu052559.1 14 KGAWSKEEDDKLRAYVLRYGHWNWRLLPKYAGLARCGKSCRLRWVNYL 61 79****************99**********************97 PP
2	Myb_DNA-binding	55.7	1.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l++++++qlG++ W++Ia+ + gRt++++k++w++++ Oeu052559.1 67 RGNFTKEEEDLIAELHNQLGNK-WSAIAANLT-GRTDNEIKNYWHTHM 112 89******************.****9.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MVRPCFFDNN GMKKGAWSKE EDDKLRAYVL RYGHWNWRLL PKYAGLARCG KSCRLRWVNY 60 LKPGLKRGNF TKEEEDLIAE LHNQLGNKWS AIAANLTGRT DNEIKNYWHT HMKRCNKRKA 120 AAAQVTVPQT IENTPSQIQT PKESEKLMLL PNTANWIACD TTSFDSIAVP QDNSLPETFP 180 PITYNGQTNM FPAVPDPFEL SSELNFSELS CPDFSMLNDL CWVGDDSVNS SDSGFQGNFG 240 IEPSETNYLL PVEEAGPVSP HISYFDDFMV NMF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	2e-51	MYB family protein