PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052602.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 458aa    MW: 52532.8 Da    PI: 6.4562
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052602.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2943.8e-90784541373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lLl  A+ +++++ + a   L  l +++s +gd++qR+aayf+ +L arl+   s  y+ +  ++t+    +e+++a++  ++vsP+++f+h+ta
  Oeu052602.1  78 LIHLLLISATSIDENNINSAVDSLYDLYQNVSLTGDSLQRVAAYFADGLIARLLTRKSPFYDMIMKTPTH----EEKFFAFTDMYKVSPFYQFAHFTA 171
                  689****************************************************9*****999888886....788899999*************** PP

         GRAS  99 NqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrled 188
                  NqaIl+a+e e     +++HiiDfdis+G+QWp+L+q+L++ +  ++  sl+iTg+g+    + eel+et+ rL +fA+++ ++ fef  l    +  
  Oeu052602.1 172 NQAILQAFEMEepnnnRTLHIIDFDISYGFQWPSLMQSLSETAtiSNRISLKITGFGR----NLEELQETETRLVSFAKTFhNLVFEFYGL----VRG 261
                  ********98888887899*********************988778888*********....99****************8579******8....666 PP

         GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                   ++ +L+ k++E++aVnlv++l +l   s s+ s   e+Lk v sl+P  vv+veqe +++ ++Fl rf+e+l+y++alfdsl++ lp +s er  +E
  Oeu052602.1 262 SNPVKLKKKKNETVAVNLVFHLNSLN--SFSMIS---ETLKYVHSLNPSTVVLVEQEGSRSPHNFLSRFMESLHYFAALFDSLDNCLPLDSVERFQIE 354
                  7889*******************997..777777...9************************************************************ PP

         GRAS 287 rellgreivnvvacega.errerhetlekWrerleeaGFkpvplsekaakqaklllrkv......ksdg....yrve.eesgslv.lgWkdrpLvsvS 371
                  +  lg+ei+ v    ++ e   r e++e+W+ r+e+ GF  ++ s+k  +qaklll+        ++dg    +rv   ++g+++ lgW+d+ L ++S
  Oeu052602.1 355 KNHLGKEIKHVMNSDKEyENCPRFEKMETWKGRMENHGFMGLKQSSKSIMQAKLLLKIRshcsaiYFDGenggFRVFvRDDGEAIsLGWQDKILSTAS 452
                  **********998765515889**********************************854111111233333346665555777777************ PP

         GRAS 372 aW 373
                  +W
  Oeu052602.1 453 SW 454
                  ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    
MESTIDEEEF LSLRLAIVTD SGRETKRKRK RREASNPSDS SESCEEGKIF SLLQMREQMI  60
KVDQRRKEMA EDGKGLELIH LLLISATSID ENNINSAVDS LYDLYQNVSL TGDSLQRVAA  120
YFADGLIARL LTRKSPFYDM IMKTPTHEEK FFAFTDMYKV SPFYQFAHFT ANQAILQAFE  180
MEEPNNNRTL HIIDFDISYG FQWPSLMQSL SETATISNRI SLKITGFGRN LEELQETETR  240
LVSFAKTFHN LVFEFYGLVR GSNPVKLKKK KNETVAVNLV FHLNSLNSFS MISETLKYVH  300
SLNPSTVVLV EQEGSRSPHN FLSRFMESLH YFAALFDSLD NCLPLDSVER FQIEKNHLGK  360
EIKHVMNSDK EYENCPRFEK METWKGRMEN HGFMGLKQSS KSIMQAKLLL KIRSHCSAIY  420
FDGENGGFRV FVRDDGEAIS LGWQDKILST ASSWCCV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12632KRKRKRR
22732RKRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.18e-52GRAS family protein