PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052712.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 279aa    MW: 31939.8 Da    PI: 4.4119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052712.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08164208655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++ r+RR++i ++ +eL +l+P       +K++ ae+ + A +YI++Lq
  Oeu052712.1 164 SIAARQRRRKITEKTQELGKLIPGG-----QKMNTAEMFQAAYKYINYLQ 208
                  6788*******************86.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MALSYYSNWD ALQHLNSDIS CSFAQTQTDL APELLDFNND FALTDTWFDP LFQPDDTFYP  60
DNYNALIPDH PNTLSPEPFL LQEYESYNYS KRQKSYNYQD YYSEYQNGLF CWYIPNPSML  120
QDFSSPEVMV PPFPDFSTAP PVYSSGSSES VVKKPNGGSL SAQSIAARQR RRKITEKTQE  180
LGKLIPGGQK MNTAEMFQAA YKYINYLQAQ VGILEFMGSK QETFSCEELH DLLESPLIQE  240
KLYSTDKCLV PQKFVQALAN DHEIQPKLQV LKELKQLI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-26bHLH family protein