PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052770.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family WOX
Protein Properties Length: 140aa    MW: 15721.8 Da    PI: 9.5
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052770.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.62e-084402557
                 --HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox 25 psaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 p +ee  ++ k l     + +++V++WFqNrR + ++
  Oeu052770.1  4 PPKEETVRIRKLLekfgAVGDANVFYWFQNRRSRSRR 40
                 556666666666666678999*************997 PP
2Wus_type_Homeobox63.83.4e-211422465
  Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +++P+kee+ ri++ Le++G+++d+NVfyWFQNr++R+r++q
        Oeu052770.1  1 MVNPPKEETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 42
                       78**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MVNPPKEETV RIRKLLEKFG AVGDANVFYW FQNRRSRSRR RQRQIQASVS GGEQPQTQPW  60
TGGCDTIQYE NTAAAGLITV YINGVATEIP RGPLDMKAMF GQDFVLFHSS GVPVQVNEYG  120
FLMQSLQHGE SYFLVPRHS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03660.15e-27WOX family protein