PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052786.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 237aa MW: 25887.6 Da PI: 6.3007

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052786.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	119.6	1.7e-37	34	135	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCkvlrrkC +Cv+ap+f ++q +++fa+vhk+FGa+nv+kll ++p + ++da+ ++ yeA+ar++dPvyG+v++i +lqqq+++l++el+l+ Oeu052786.2 34 PCGACKVLRRKCIIECVFAPHFGSDQgAARFAAVHKVFGARNVSKLLLHIPANWQHDAVVTISYEAQARLSDPVYGCVSTIIALQQQVASLQEELSLV 131 7*********************9989******************************************************************** PP DUF260 98 keel 101 +++l Oeu052786.2 132 QTQL 135 9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MDGSQGDGTS RNRRKGSGKR AEMATGSPRP LNAPCGACKV LRRKCIIECV FAPHFGSDQG 60 AARFAAVHKV FGARNVSKLL LHIPANWQHD AVVTISYEAQ ARLSDPVYGC VSTIIALQQQ 120 VASLQEELSL VQTQLINSRY AMVNALQNSP SQPQHHQQQH VSVLQPAYSN TSASNNNLIN 180 INNFSTTTSL EQTAAPSNSL EPSRRTFPSG QDDEEEEEEE DDESRDPIAF TNQIFH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	3e-67	LBD family protein