PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052894.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 529aa MW: 59913.7 Da PI: 6.7156

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052894.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.8	8.1e-30	100	185	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea Oeu052894.1 100 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 185 8***********************************999*************************98..55667*****85 PP
2	trihelix	51.2	3.3e-16	387	457	2	71
trihelix 2 WtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W++ e+ Li++r+++++r+++g +++ lWe ++ km+ g+ rs+ Ckekwe++n++ k+++ +k++ Oeu052894.1 387 WPECEITRLIQLRTNLDSRFQQGGiSEEVLWEGIATKMACFGYDRSALVCKEKWESVNNYVIKCNKKRKEN 457 *******************965499************************************999974 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MVMDDETGMA DLRQYMNRRP FFPPIPPATD LLSGHHPGLT QPQQYDMFMI PPGLQPAFRS 60 DSTTSNTTAG GGSSSSAGGF GGFELEGGGL NGCGDGGTGR WPRQETLTLL EIRSRLDPKF 120 KEANQKGPLW DEVSRIMSEE HGYQRSGKKC REKFENLYKY YKKTKEGKAG RQDGKHYRFF 180 RQLEALYGEI SNTVPVSETH LAGSTFRYNI SNNNVLTPNQ QEALQAPKLS DTSLSLSNSS 240 DFDTTSSDGG DVNGGTNDDS SGNRQKKRGK RRWKAKIKDF IDAQMRKLMD KQEAWMEKMM 300 RTIEDKEQER IIREEEWRKQ DADRIEKEHK FWTNERGWIE ARYAALMEAI RNVTGKDLKA 360 SPSDELMAAE TRSLSENQNN DEKGDIWPEC EITRLIQLRT NLDSRFQQGG ISEEVLWEGI 420 ATKMACFGYD RSALVCKEKW ESVNNYVIKC NKKRKENPKP CLYYCQNNES ISNNHGGAFC 480 DNTSGLGPET SPSNSNTGNA MNDSCFRYFM GDDHNMWENY GLKLNKLG*

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MVMDDETGMA DLRQYMNRRP FFPPIPPATD LLSGHHPGLT QPQQYDMFMI PPGLQPAFRS  60
DSTTSNTTAG GGSSSSAGGF GGFELEGGGL NGCGDGGTGR WPRQETLTLL EIRSRLDPKF  120
KEANQKGPLW DEVSRIMSEE HGYQRSGKKC REKFENLYKY YKKTKEGKAG RQDGKHYRFF  180
RQLEALYGEI SNTVPVSETH LAGSTFRYNI SNNNVLTPNQ QEALQAPKLS DTSLSLSNSS  240
DFDTTSSDGG DVNGGTNDDS SGNRQKKRGK RRWKAKIKDF IDAQMRKLMD KQEAWMEKMM  300
RTIEDKEQER IIREEEWRKQ DADRIEKEHK FWTNERGWIE ARYAALMEAI RNVTGKDLKA  360
SPSDELMAAE TRSLSENQNN DEKGDIWPEC EITRLIQLRT NLDSRFQQGG ISEEVLWEGI  420
ATKMACFGYD RSALVCKEKW ESVNNYVIKC NKKRKENPKP CLYYCQNNES ISNNHGGAFC  480
DNTSGLGPET SPSNSNTGNA MNDSCFRYFM GDDHNMWENY GLKLNKLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-115	Trihelix family protein