PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052974.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 341aa    MW: 37642.2 Da    PI: 8.8415
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052974.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.000122332711255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Oeu052974.1 233 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEATGYIKFLQ 271
                  7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MTPEMELFHW ANPTGNLQSG RIKEEFPDNF NPKFTEILNR QSSSIEDFRV NPSSYSKNNE  60
LRDFPFNDLS AKLLLRTLSS GNLGNGQNIS PQNFYSNSLS TGINGSTQSG RGSSQIFPSI  120
NVSNFNLQSA QLENSGNMDM NLQALDHLTA SKFHGNFMSP NSQNELGHYK EGLCYGLDYM  180
QQSSQMSMNC PNKISPLSNG VAEAKRSNSI LEPKAPKKSR IEPRTSCPPL KVRKEKLGDR  240
IAALQQLVAP FGKTDTASVL MEATGYIKFL QNQVETLSVP YMKSSRNKTS RATKGVSTDD  300
ENEEPKRDLR SRGLCLVPLS SLSYITDGVG GAVWPQPHFN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-60bHLH family protein