PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053261.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 205aa    MW: 22633.5 Da    PI: 9.5893
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053261.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.93.1e-192265245
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                 +i n+ n qvtfskR  g+lKKA+EL++L++aev +i fs++gk
  Oeu053261.1 22 KIGNEKNLQVTFSKRHSGLLKKASELCTLTGAEVGMIFFSPSGK 65
                 799****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MSSSSQASSR KGKGRQKVAM EKIGNEKNLQ VTFSKRHSGL LKKASELCTL TGAEVGMIFF  60
SPSGKPFAFG HPDVNTVADR FLTGNTRVLN HSEKVVQVYR SEKIIQQNLE LTINEDVIEA  120
EKRRQEELEE KKKGSQYSFP RPIEELSYEE LVQLRESYAK FIQDVAVETE KHKSGLVSPH  180
LHGTKPDSGG GKDFSFAAGA SSSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-30M-type_MADS family protein