PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053378.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 584aa    MW: 65379.5 Da    PI: 5.9942
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053378.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS430.81.1e-1312135821373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL++cA+a+s+++l++ ++l+++ +  +s +g+p+qRl ay+ e+L ar  +s++++ykal+++e +   s++ l+++++++e++P+lkf++++a
  Oeu053378.2 213 LKNLLIACARALSDNNLAEFERLVEQARGAVSISGEPIQRLGAYLIEGLVARKESSGTHIYKALNCKEPE---SKDLLSYMHILYEICPYLKFGYMAA 307
                  5789*****************************************************************9...9************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N aI ea  +e+r+HiiDf+i qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + + l ++g+rLa + e++++p+ef+  +     +++ ++L
  Oeu053378.2 308 NGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKyaRGDCLAAVGRRLAAISEKFNIPVEFHS-IPVYAPEVTRDML 404
                  ****************************************************9999999*************************.6888999****** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  +v++gEalaVn+ lqlh+++desv+++++rd++L++vkslsPkvv++veqe+++n+++F+ rf+e+leyy a+f+s+++++pr+ +eri+vE+++l+r
  Oeu053378.2 405 DVRHGEALAVNFPLQLHHTPDESVDVSNPRDKLLRMVKSLSPKVVTLVEQESNTNTAPFVPRFIETLEYYLAMFESIDVTMPRDRKERINVEKHCLAR 502
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  +ivn++aceg+er+erhe l+kWr r+++aGF++ pls+++++ +++llr ++ + +++ e +g ++lgWk+r+Lvs+SaW
  Oeu053378.2 503 DIVNIIACEGKERVERHELLGKWRLRFMMAGFQQFPLSSYVNSVIRSLLRSYS-EHFTLLETDGGMLLGWKERNLVSASAW 582
                  *****************************************************.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    
MDSHFFGHSV AGGDLSYSSY PVGSSIPTRL FGSIKFDAQN SPNSSLFTHF EPETSTTYID  60
SQEQEQHSST DNLSEATPSS NSSLDYYSYF QQLSPSPVYP LDSLLFRSCG PSYIQVANHN  120
QNIKHALQEL ETALMAPDLD EEVTTSEPSL GGNKRPQTPG QQSRSWNQEP QGSSHSHQSE  180
SSYVNRFGNS GDELYIERRQ KAREDLGTPP NNLKNLLIAC ARALSDNNLA EFERLVEQAR  240
GAVSISGEPI QRLGAYLIEG LVARKESSGT HIYKALNCKE PESKDLLSYM HILYEICPYL  300
KFGYMAANGA IAEACRNEDR IHIIDFQIAQ GTQWMTLLQA LAARPGGAPH VRITGIDDPV  360
SKYARGDCLA AVGRRLAAIS EKFNIPVEFH SIPVYAPEVT RDMLDVRHGE ALAVNFPLQL  420
HHTPDESVDV SNPRDKLLRM VKSLSPKVVT LVEQESNTNT APFVPRFIET LEYYLAMFES  480
IDVTMPRDRK ERINVEKHCL ARDIVNIIAC EGKERVERHE LLGKWRLRFM MAGFQQFPLS  540
SYVNSVIRSL LRSYSEHFTL LETDGGMLLG WKERNLVSAS AWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein