PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu053395.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 415aa MW: 45834.7 Da PI: 6.6095

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu053395.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.3	4.1e-06	304	342	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A++YIksL Oeu053395.1 304 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIDYIKSL 342 5778999********998.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MADEFQLGSG GNWWDTSRKF ETGSSAQKST TLNSVASYGW TNEMVDDKPR TSMDTGTVPG 60 SSMVLQGHDQ SSGGGLLVDT NMHMMALGLS SQAMDWNQSI FHGGEKADSS FRSMLQEDLS 120 NSNSNFQQET GTASSQDHWR EKIYSASSED SHVNEYKQTS FPVDSAAAYG LLLSENQPQH 180 STYENRPMNF PYPTNYGTNS GEWTPSWNRF PQTFLRTTVP PKQPSANVHF TNKTPFWNAP 240 GADDVRPNFF SSLPTPLPTP ALDEKPKNTS EVRDLSTTAK KTSTQASNKR LRNETPTPLP 300 AFKVRKEKMG DRITALQQLV SPFGKTDTAS VLSEAIDYIK SLHERIGTLS APYMKSVAPI 360 QPQQNSDKSK VPDQGPRQDL RSRGLCLVPV SCTYPFTHDT AVDFWTPAFS GPFR*

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MADEFQLGSG GNWWDTSRKF ETGSSAQKST TLNSVASYGW TNEMVDDKPR TSMDTGTVPG  60
SSMVLQGHDQ SSGGGLLVDT NMHMMALGLS SQAMDWNQSI FHGGEKADSS FRSMLQEDLS  120
NSNSNFQQET GTASSQDHWR EKIYSASSED SHVNEYKQTS FPVDSAAAYG LLLSENQPQH  180
STYENRPMNF PYPTNYGTNS GEWTPSWNRF PQTFLRTTVP PKQPSANVHF TNKTPFWNAP  240
GADDVRPNFF SSLPTPLPTP ALDEKPKNTS EVRDLSTTAK KTSTQASNKR LRNETPTPLP  300
AFKVRKEKMG DRITALQQLV SPFGKTDTAS VLSEAIDYIK SLHERIGTLS APYMKSVAPI  360
QPQQNSDKSK VPDQGPRQDL RSRGLCLVPV SCTYPFTHDT AVDFWTPAFS GPFR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	4e-54	bHLH family protein