PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053597.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 219aa    MW: 24441.8 Da    PI: 5.4692
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053597.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF862.2e-27959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+i+n+s rqvtfskRr+g+lKKA+ELSvLCda+ a+iifsstgkl++++s
  Oeu053597.1  9 KKIDNTSARQVTFSKRRKGLLKKAKELSVLCDADLALIIFSSTGKLFDFAS 59
                 68**********************************************986 PP
2K-box38.16.5e-14921571984
        K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 
                   ++++L +e+ +  +++R + Ge+L++Ls++eLq+Le+ Le++l+ +++k +e ++++i++lq+  
  Oeu053597.1  92 SNYSRLSQEVAERSHQLRYMRGEELQELSIEELQKLERSLETGLSCVKEKMDEKIMKEINQLQQTV 157
                  57899999999999*************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MVREKIPIKK IDNTSARQVT FSKRRKGLLK KAKELSVLCD ADLALIIFSS TGKLFDFASS  60
SMKNILEKHG LHSKNLEKLE QSSLELQIVG DSNYSRLSQE VAERSHQLRY MRGEELQELS  120
IEELQKLERS LETGLSCVKE KMDEKIMKEI NQLQQTVTMP NLEISKGEKN MIAADSANIV  180
EEEGQSSESI TNACNSIGPP QDSDSSDTSL KLGLPYFS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.16e-64MIKC_MADS family protein