PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu053598.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 254aa MW: 28846.1 Da PI: 6.173

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu053598.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.5	7.5e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n+s rqvtfskRr+g+lKKA+EL vLCda+va+iifsstgkl+e++s Oeu053598.1 9 KKIDNTSARQVTFSKRRKGLLKKAKELTVLCDADVALIIFSSTGKLFEFAS 59 68***********************************************86 PP
2	K-box	45	4.6e-16	94	171	21	98
K-box 21 lakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++L e+ + +++R + Ge+L++Ls +eLq+Le+ Le++l+++ +kK+e ++++i++lq+k el een++Lr ++ Oeu053598.1 94 YSRLSGEVAERSHQLRYMRGEELQELSTEELQKLERSLETGLSRVIEKKDEKFMKEINQLQQKRMELMEENERLRLQI 171 667777777778899************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MTREKIQIKK IDNTSARQVT FSKRRKGLLK KAKELTVLCD ADVALIIFSS TGKLFEFASS 60 SMKDILEKHG LHTKNLEKLE QSSLELQIVG DINYSRLSGE VAERSHQLRY MRGEELQELS 120 TEELQKLERS LETGLSRVIE KKDEKFMKEI NQLQQKRMEL MEENERLRLQ ISRGKKNMIA 180 ADSVNIVEEE GQSSESITNA CNSIGPPQDS DSSDTSLKLG LISFLAGCHT LAETMELNLI 240 VDGWMITCRI WMF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	2e-71	MIKC_MADS family protein