PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu053647.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 566aa MW: 61243.2 Da PI: 8.4169

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu053647.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.8	2.2e-24	207	251	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e Oeu053647.1 207 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 251 79****************************************985 PP
2	QLQ	60.9	3.6e-21	140	176	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy++an+P+P++Ll +i+k Oeu053647.1 140 GPFTPSQWMELEHQALIYKYIIANVPIPSYLLNPIRK 176 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MDSGVLGLDG LVCLTAATTT NSVFASENAA EAEHKCYGSG FFKQERRAGT TSEDEYREFK 60 LAKTASSEAM LLQERIPLLR SNSSNLSEGQ QMLSFSSPNS QTLTLPYCQQ TSSSFNRNTG 120 YGSGGINAAS MHGLLSGVRG PFTPSQWMEL EHQALIYKYI IANVPIPSYL LNPIRKALES 180 TCFSSFSGLR PNALGWGSFH LGFSNTDPEP GRCRRTDGKK WRCSRDAVVD QKYCERHMNR 240 GRHRSRKPVE GQSGHSVTGT NTTTTKLMPI TSSISAAAVV PGAGASNNLT LNSRSSLEKE 300 NVDEGYQRTT GLSMLSSNTS LKDNRYSVPK KQNAYVESSC SKFGLVCSDS LLNPLDRSSS 360 FVNSNLNDHK SKSQHPLRQF MDEWPKNPSE CSAVSWPDVD IQSDRTQLSI SIPVVTSDFV 420 SSTSSPVNEK LTASRLRLSP ELEATQMGLG VGIISSEQRQ RQTNWIPISW EHSEGGPLGE 480 VLHSTNNSKN DRKNTMALSR MEGWDRSPCL ASSPTGVLQR GAHGSLSNSS AGSSPRAESS 540 KTLDGASLCN GPGGSSLMNP SFPAM*

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MDSGVLGLDG LVCLTAATTT NSVFASENAA EAEHKCYGSG FFKQERRAGT TSEDEYREFK  60
LAKTASSEAM LLQERIPLLR SNSSNLSEGQ QMLSFSSPNS QTLTLPYCQQ TSSSFNRNTG  120
YGSGGINAAS MHGLLSGVRG PFTPSQWMEL EHQALIYKYI IANVPIPSYL LNPIRKALES  180
TCFSSFSGLR PNALGWGSFH LGFSNTDPEP GRCRRTDGKK WRCSRDAVVD QKYCERHMNR  240
GRHRSRKPVE GQSGHSVTGT NTTTTKLMPI TSSISAAAVV PGAGASNNLT LNSRSSLEKE  300
NVDEGYQRTT GLSMLSSNTS LKDNRYSVPK KQNAYVESSC SKFGLVCSDS LLNPLDRSSS  360
FVNSNLNDHK SKSQHPLRQF MDEWPKNPSE CSAVSWPDVD IQSDRTQLSI SIPVVTSDFV  420
SSTSSPVNEK LTASRLRLSP ELEATQMGLG VGIISSEQRQ RQTNWIPISW EHSEGGPLGE  480
VLHSTNNSKN DRKNTMALSR MEGWDRSPCL ASSPTGVLQR GAHGSLSNSS AGSSPRAESS  540
KTLDGASLCN GPGGSSLMNP SFPAM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	3e-98	GRF family protein