PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu053685.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 281aa MW: 31720.5 Da PI: 7.1086

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu053685.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.9	4.7e-13	14	68	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg......kgRtlkqcksrwqkyl 48 +g WT+eEd +l+++ ++ G++ +W+t +++ g + R++k+c++rw++yl Oeu053685.1 14 KGHWTPEEDWKLKEYMEKNGTEgNWTTLPQKAGmgifhfELRCGKSCRLRWLNYL 68 789**********************************99**********97 PP
2	Myb_DNA-binding	34.3	5.7e-11	76	117	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T Ed ++ +++ G++ W+ Ia ++ gRt++++k++w++ Oeu053685.1 76 EFTDNEDRIICSLFASIGSR-WSIIAGQLP-GRTDNDIKNYWNT 117 699***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MGRTPCCVKA NVKKGHWTPE EDWKLKEYME KNGTEGNWTT LPQKAGMGIF HFELRCGKSC 60 RLRWLNYLRP NIKHREFTDN EDRIICSLFA SIGSRWSIIA GQLPGRTDND IKNYWNTKLK 120 KKFLLELVPA MLQKNHPQAI TYSLHHNSSV ESPHSASTAL QPQDGYVGVG SMHNNQINDS 180 RLIIFGSGEA SCSSSDGSCT TNHIISHGQE VVEYDHGFSS HFSSGIDENT KLKLAKNGDS 240 LNGYVCENPT NICFYEDSLD YSIEVMKQLD YTNNFSNNWI *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-63	MYB family protein