PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053882.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 717aa    MW: 80721.9 Da    PI: 6.4613
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053882.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS373.33.2e-1143417121374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL++cA+av s d +  ++lL ++++++s +gd ++Rla+yf++AL+ar+a++++  y a+ +s+ s    se l+++++f  ++P+ k+s++ a
  Oeu053882.1 341 LRSLLMQCAQAVGSYDSRTFNELLIKIRQHSSTHGDETERLAHYFAKALEARMAGTGTASYTAFGSSRIS---ASEILKSYHTFITACPYRKMSNFFA 435
                  689****************************************************999999999888887...89*********************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N+ I + ++g++r+HiiDf+i +G+QWp+L++aL+++p+gpp+lRiTg++ p++g   +e++eetg rL+k++++++vpf+fn+ +ak++e+++leeL
  Oeu053882.1 436 NRSIRKLAKGAKRLHIIDFGILYGFQWPCLIKALSEQPGGPPKLRITGIDFPQPGfrPAERVEETGIRLTKYCKRFNVPFKFNA-IAKKWETVQLEEL 532
                  ******************************************************9*****************************.7************ PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  +++++E l+Vn+ ++lh+++de+v  +s+rd+vL+l+k+++P++ +    +  +n++ F++rf eal ++s++fd +ea++pre+ +ri +Ere++g+
  Oeu053882.1 533 KIDKNELLIVNSLYRLHNVPDETVIASSPRDSVLNLIKRINPDMYIEGVVNGTYNTPFFVTRFREALFHFSSMFDIFEATVPREDPDRILYEREFFGK 630
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +++n++aceg+er+ r et+++W+ r  +aGFk++pl+++++k ++  ++  + + ++v+e+ +++++gWk+r ++++S+Wr
  Oeu053882.1 631 DAMNIIACEGTERVDRPETYKQWQVRNLRAGFKQLPLDQEIVKFIRNKVKLNYHKDFSVDEDGKWVLQGWKGRVIYALSCWR 712
                  *****************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MDVVGQYLAP TNDFKFNCRS KSVLPEENHV NGYKMNHEFK DLAFVSNGSS SIVDAEGETC  60
KENDHSDEIL QFISQMLMEE EDLGNKPCML QDSLALQAAE KCLSDVLNGK SPCSSIGDPF  120
AQTPNGNLTK TCSVFSSESS SDDSDSIESK SYLNQGDFEP LIQCSSLSNL QLNPPSFSSS  180
NSVDADVYGL DAFDMNASRV QNSLSGNKFG LKSSGSVGEI TSSPPNDAFF GSDLDPKEKA  240
GEFEGAMVGN GEYLSQNISR EKKNRYREEA AFSEEHRSSK QLANNNGETE PLEMFDKVLL  300
CPAVESDSEK LFQQNRQLTG SNRGRPRGGK RQGFQKEVVD LRSLLMQCAQ AVGSYDSRTF  360
NELLIKIRQH SSTHGDETER LAHYFAKALE ARMAGTGTAS YTAFGSSRIS ASEILKSYHT  420
FITACPYRKM SNFFANRSIR KLAKGAKRLH IIDFGILYGF QWPCLIKALS EQPGGPPKLR  480
ITGIDFPQPG FRPAERVEET GIRLTKYCKR FNVPFKFNAI AKKWETVQLE ELKIDKNELL  540
IVNSLYRLHN VPDETVIASS PRDSVLNLIK RINPDMYIEG VVNGTYNTPF FVTRFREALF  600
HFSSMFDIFE ATVPREDPDR ILYEREFFGK DAMNIIACEG TERVDRPETY KQWQVRNLRA  660
GFKQLPLDQE IVKFIRNKVK LNYHKDFSVD EDGKWVLQGW KGRVIYALSC WRPSHK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-177GRAS family protein