PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054190.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 206aa    MW: 22364.6 Da    PI: 7.7158
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054190.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26093.13.2e-292102196
       DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                  +C++C+vlr++C+++C+l+p++      a+q  ++ +v+k+FG++ ++++++a+p ++r+++++sl+yeA  r+ +Pv+Gavg++++++++++q++++
  Oeu054190.1   2 SCNGCRVLRKGCSENCILRPCLqwienSAAQGYATVFVAKFFGRAGLISFISAVPVNQRPAVFQSLLYEAAGRTVNPVNGAVGLLSTGNWHVCQAAVD 99 
                  6*********************99988889999*************************************************************9988 PP

       DUF260  94 lal 96 
                  + l
  Oeu054190.1 100 TIL 102
                  755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MSCNGCRVLR KGCSENCILR PCLQWIENSA AQGYATVFVA KFFGRAGLIS FISAVPVNQR  60
PAVFQSLLYE AAGRTVNPVN GAVGLLSTGN WHVCQAAVDT ILQGGTLRPI SEFVSGPPEL  120
DELQDPSLNL RLKVQKHRRL PDELGNLTEV ADLDLNLTTG FESKNLSSLF EKRRLGSPSM  180
NSEESGTTTC ENQLPTKPKL LNLFN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.19e-72LBD family protein