PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054280.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 384aa    MW: 42993.4 Da    PI: 7.9428
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054280.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.52.8e-16741135
         GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                 C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  Oeu054280.1  7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
                 ****************88888***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEYDDDEKH  60
RVSKVDYVSI KSKREKGFKR KQDVDFSVFG GFPHDHNQGF RKGFDEDTSN RSSSGSAISN  120
PESCVQYGSA DASDLTGPPQ SIVWDTMVPS KKRTCFSRSK PSPFEKITKD LYTIWHEQQS  180
SCFSGTSEEE LLLESDKPMV SVETGHGSVL IRHPNAIARE EESEASSLPI DNKLHPICNA  240
YSQRTTLPVR IKKPAGQGTE GHQIKRDKDQ LEKLQMLRHH NSPLRYVDLQ DILNFDKFVS  300
HLTYDEQQQL LKILPSIDIS AAPESLISMF DSPQFKENLS SFQKLLAEGV FDNSLSGVKT  360
EDCRTLKKLA LCNLIKSKWG GTI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-116GATA family protein