PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054505.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 361aa    MW: 40170.2 Da    PI: 8.4054
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054505.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.74.9e-192381357
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Oeu054505.1 23 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsHIEPKQIKVWFQNRRCREKQ 81
                 5679*****************************************************97 PP
2bZIP_120.11.4e-06751181861
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                  rr+R++ ++e  +L+    +L+a Nk L +e+++l+k+v++l  
  Oeu054505.1  75 RRCREKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVY 118
                  9***************************************9965 PP
3START1471.7e-461683442173
                  HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEX CS
        START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvae 97 
                  +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+ ++ W ++++++ +l+v+ ++  g+++l++++
  Oeu054505.1 168 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKERPSWFRDCRAVNVLNVLPTAngGTIELIYMQ 264
                  789*******************************************************.7777777777****************9999********* PP

                  XTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
        START  98 lqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlk 173
                  l+a+++l+p Rdf+ +Ry+  + +g++v++++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h++l+
  Oeu054505.1 265 LYAPTTLAPgRDFWLLRYTSVMDDGSLVVCERSLGNTQNGPSmppVPNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLE 344
                  ***************************************9999999*******************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MAMSCKDANK AAAAAVGIMD NGKYVRYTPE QVEALERLYH ECPKPSSIRR QQLIRECPIL  60
SHIEPKQIKV WFQNRRCREK QRKEASRLQS VNRKLSAMNK LLMEENDRLQ KQVSQLVYEN  120
GYFRQHTQNN ALPTKDTSCE SAVTSSQQHR LTPQHPPRDA SPAGLLSIAE ETLTEFLSKA  180
TGTAVEWVQM PGMKPGPDSI GIVAISHGCT GVAARACGLV GLEPTRVAEI LKERPSWFRD  240
CRAVNVLNVL PTANGGTIEL IYMQLYAPTT LAPGRDFWLL RYTSVMDDGS LVVCERSLGN  300
TQNGPSMPPV PNFVRAEMLP SGYLIRPCEG GGSIIHIVDH MNLEVKLFLP SLTFYNLIHD  360
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.30.0HD-ZIP family protein