PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu054593.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 123aa MW: 13325 Da PI: 7.7706

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu054593.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	27.4	9.6e-09	1	34	67	100
DUF260 67 arardPvyGavgvilklqqqleqlkaelallkee 100 +r+rdPvyG+vgvi+ lq+ql+ql+ +l+ +k+e Oeu054593.1 1 MRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSE 34 699**************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
MRLRDPVYGC VGVISLLQHQ LRQLQMDLSC AKSELSKYQN LGITGHGLIA AAATATHHHQ 60 QNFGINLIGG GVGSRDHPFH HQFFPSNQQQ VIRSFDGENG YDASSLLAMN VSASIGHLSQ 120 FQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-19	LBD family protein