PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054678.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 163aa    MW: 19076.4 Da    PI: 6.5608
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054678.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.61.4e-2063117357
                  --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
     Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                  k++++t+eq++ Le+ Fe ++++  e++++LAk lgL+ rqV vWFqNrRa++k+
  Oeu054678.1  63 KKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKYLGLQPRQVAVWFQNRRARWKN 117
                  5678*************************************************95 PP
2HD-ZIP_I/II132.22e-4262154193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ekkrrl+ eqv+lLE+sFe+e+kLeperK++la+ LglqprqvavWFqnrRAR+k+kqlE+dy++Lk++y++l ++ +++ ke+e+L++e+k+
  Oeu054678.1  62 EKKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKYLGLQPRQVAVWFQNRRARWKNKQLERDYDQLKSSYESLLSNYDSILKENEKLKAEVKS 154
                  69***************************************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MDFGRSFFNS SYSGNMFPGN GDSIFHGATS VMSMEETAKR RPFFSTPEEL YDEEYLDEQS  60
PEKKRRLTPE QVNLLEKSFE AENKLEPERK TQLAKYLGLQ PRQVAVWFQN RRARWKNKQL  120
ERDYDQLKSS YESLLSNYDS ILKENEKLKA EVKSHLANLT VF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111119RRARWKNKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-64HD-ZIP family protein