PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054709.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 953aa    MW: 105830 Da    PI: 5.8749
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054709.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.55.9e-24163264199
                  EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                  f+k+lt sd++++g +++p++ ae+       ++++++ ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv a++L++gD v+F   ++++ +l
  Oeu054709.1 163 FCKTLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPT-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSMFVGAKRLRAGDAVLFI--RNEKSQL 257
                  99*********************999*****9555554.49************************************************..5577778 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  +++v+r 
  Oeu054709.1 258 LLGVRRV 264
                  9999985 PP
2Auxin_resp119.72.3e-39289372183
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                  aahaa+++s+F+++YnPra++seF+++++k++ka++ +++svGmRf m+fete+ss+rr+ Gtvvg+sdldp+rWpnSkWr+L+
  Oeu054709.1 289 AAHAAANRSPFTIFYNPRACPSEFIIPLAKYRKAVYgTQFSVGMRFGMMFETEESSKRRYIGTVVGISDLDPLRWPNSKWRNLQ 372
                  79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 953 aa     Download sequence    
MRICLFDKSK KGRGPRYMGS VEEKLKPGGL VGGAHNLLEE MKLLKEMQDH SGTRKIINSE  60
LWHACAGPLV TLPQVGSLVH YFPQGHSEQV AVSTNRTATS QTPNYPNLPA QLLCQVHNVT  120
LHVYKETDEI YAQMSLQPVN SEKDVFPIPD FGVKPSKHPT EFFCKTLTAS DTSTHGGFSV  180
PRRAAEKLFP QLDYSMQPPT QELVVRDLHD NTWTFRHIYR GQPKRHLLTT GWSMFVGAKR  240
LRAGDAVLFI RNEKSQLLLG VRRVNRQQTA LPSSVLSADS MHIGILAAAA HAAANRSPFT  300
IFYNPRACPS EFIIPLAKYR KAVYGTQFSV GMRFGMMFET EESSKRRYIG TVVGISDLDP  360
LRWPNSKWRN LQVEWDEPGC GDKQNRVSPW EIETPESLFV FPSLTASFKR PFHSAFIGAQ  420
TEWDSLINGP FIRIPENRNT DFQCSSVSTL WSEQLMKMLM KPHGVNRPGN VAPSMGETII  480
NDAALQESKA LMQSEIKQKP EPIHPETASL QKETYPQSLV GQPNTTNSSN FGTSLELEKL  540
EPELAKNQLS QFESEGPGPT NEDKLSVKPS NPNNLVADLA IMNQNGGSLP LQTSPWIMQS  600
LLESQILQSP QSDLSQLESA NVNSFLQNPG RMECNSYMPV CHPLTASFST PGYSSILKRS  660
DQTTTSAETV CPVLPSTGQG LWDPQLNNPK CASQENLLDP SPHHDLSNLQ YASCSYGLKD  720
MSEESHVQSD IYDCLTIDGN NSGSTVIDPS ISNTILDDFC TLKNADFHNP SDYLMGNFSS  780
SQDVQSQITS ASLVDSQTFP LQEYADNSGR ASSSNVDFDD NTLLQNSSWQ KVTPRFRTYT  840
KIQKAGSVGR SIDVSGFKNY DELRSEIERM FGLERLLNDS GSGWKLVYVD FENDVLLVGD  900
DPWEEFVGCV RCIRILSPSE VQQMGEEGMQ LLNSAAVQGV NRGGGFHRDG QN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein