PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054858.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 338aa    MW: 38079.4 Da    PI: 8.7552
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054858.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92.1e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd++l+ +++++G g+Wkt +++ g+ R++k+c++rw +yl
      Oeu054858.1 14 KGTWTAEEDQKLLAYIEEHGYGSWKTLPARAGLQRCGKSCRLRWANYL 61
                     799*******************************************97 PP
2Myb_DNA-binding51.23e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ +E++ +++++++lG++ W+ Ia +++ +Rt++++k++w+++
      Oeu054858.1  67 RGKFSLQEEQTIIQLHALLGNR-WSVIATHLP-KRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGRSPCCEKV GLKKGTWTAE EDQKLLAYIE EHGYGSWKTL PARAGLQRCG KSCRLRWANY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS VIATHLPKRT DNEIKNYWNT HVKKKLTKMG  120
IDPVTHKLKI HALCTSQSKY TANLSHMAQW ESARLEAEAR FIHESKLVSK PYHSQSQVQL  180
LPKATAPLPL APPLPSRPPC LDILSVWTGE WTKSAKDISP IFNDFSPTLN FSSKNKFNTI  240
PTTIGHTDNS SIMPIGDVEN SLHMINGRIM DPINDSIYIT DALNVPSFVE SFTDLLPNMD  300
GITDNDVGSY DGRSEENKNY WNNELNSMTL PMGARVF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.11e-96MYB family protein