PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055076.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 330aa    MW: 36488.4 Da    PI: 5.9359
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055076.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.11.8e-144594255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 + +h+  E+rRR++iN++f+ Lrel+P++    ++K + a+ L ++++Y++ Lq
  Oeu055076.1 45 KSKHSVTEQRRRSKINERFQILRELIPNS----DQKRDTATFLLEVIQYVQFLQ 94
                 678*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MKSGKGHQEE EEEDDEEFRA RKDATPSTNN NAKDGKNSEK SNSTKSKHSV TEQRRRSKIN  60
ERFQILRELI PNSDQKRDTA TFLLEVIQYV QFLQEKLQKY EGSYQSWSSE PTKLMPWRNS  120
HWRAQDFVGH PLVMKNGFGP VSAIPGRLDE NNIAVLSTMQ SCQQNPLVSD SNRDASYGAI  180
ELQNALGNKP TGMPGPLQTS MHISVPSDGT FSHMLPRRAS DAQSTECPTT TDTLNPQEEL  240
TIEGGTINIS SVYSQELLNS LTQALQNSGV DLSQASISLQ INLGKRANPD PTSGISITKD  300
HGTSTPTPGL FQDVSNSEDL DQARKRLKI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-89bHLH family protein