PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055135.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 236aa    MW: 26397.4 Da    PI: 8.4033
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055135.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.56e-323893359
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                 k rYkeClkNhA+ +GghavDGC Efm++ g++g+ +alkCaAC+CHRnFHR+e+ee
  Oeu055135.1 38 KPRYKECLKNHAVGIGGHAVDGCTEFMAA-GADGSLDALKCAACNCHRNFHRKETEE 93
                 579*************************9.999*********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEFEEEHEGE VPSFDSLGNS NSTRPAKMPS PAETSLRKPR YKECLKNHAV GIGGHAVDGC  60
TEFMAAGADG SLDALKCAAC NCHRNFHRKE TEEAVGFSFH HHHQNQQQQL LLTHHPHGHF  120
SYRSPSGYLH VAHPQQQRPP LALPSSSGGG AGSGSRDELE DYYSNPSSSA GKKRFRTKFT  180
QEQKDKMLNL AERLGWKIQK QDEELVQQLC NELGIRRHVL KVWMHNNKHT LGKKT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-63ZF-HD family protein