PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055269.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 237aa    MW: 27660.4 Da    PI: 9.6986
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055269.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.7e-181966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ l+++vk++G g W+ +ar  g++R +k+c++rw +yl
      Oeu055269.1 19 KGPWTAEEDKSLIRYVKLHGEGKWNNVARLAGLKRNGKSCRLRWVNYL 66
                     79********************************************97 PP
2Myb_DNA-binding45.12.3e-1472116147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg  T+ E+ ++++++ ++G++ W++Iar ++ gRt++++k++w+++
      Oeu055269.1  72 RGQITPHEECIILELHGRWGNR-WSAIARSLP-GRTDNEIKNYWRTH 116
                      7888******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEVMVQNMGW GVKEGGWRKG PWTAEEDKSL IRYVKLHGEG KWNNVARLAG LKRNGKSCRL  60
RWVNYLRPDL KRGQITPHEE CIILELHGRW GNRWSAIARS LPGRTDNEIK NYWRTHFKKN  120
AKVSSENPEK LRAHLLRRER LQLQQKQKQE EDQINMKKVV SFLDESETKV PTLAQMKQEI  180
LYQHESDELG FLYSMINGYP TGSEASNEDI LWDGLWNLDD FHGKIANQHT LVANFH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.12e-70MYB family protein