PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu055459.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

YABBY

Protein Properties

Length: 191aa MW: 21711.5 Da PI: 6.6613

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu055459.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	61.9	2.6e-19	9	71	5	67
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldesl 67 + eq+Cyv+C++C+til+vsvP +sl++ +tv+C hCt+ll vn + ++ ++++ld++ Oeu055459.1 9 DHQEQICYVKCGYCTTILLVSVPCNSLSMEMTVKCEHCTTLLLVNHVQPPKQEVSSQELDKDE 71 6789***************************************99777777777777788765 PP
2	YABBY	105.2	1.3e-32	67	151	87	166
YABBY 87 ekeesastsvssekl...senedeevprvpp..virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166 +++ ++++ l se+e+e+++ + + +++PPekrqr+Psayn fikeei+r+ka+ P ++h++afs+aaknWahfP+ Oeu055459.1 67 LDKDERAIKMQNPPLgfsSEEEEENISSPINqvINKPPEKRQRAPSAYNYFIKEEIRRLKAEYPGMTHKQAFSTAAKNWAHFPQR 151 44444444444444566556666666554433589************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MSTFNYFYDH QEQICYVKCG YCTTILLVSV PCNSLSMEMT VKCEHCTTLL LVNHVQPPKQ 60 EVSSQELDKD ERAIKMQNPP LGFSSEEEEE NISSPINQVI NKPPEKRQRA PSAYNYFIKE 120 EIRRLKAEYP GMTHKQAFST AAKNWAHFPQ RQYNGGDGYG EGERKMAKYS DAKEVASEGN 180 SFLGAKTPFY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	1e-48	YABBY family protein