PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055551.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 193aa    MW: 22214.6 Da    PI: 9.2723
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055551.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.45e-151052244
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                  i n+  r  +f kR++gi  K +EL++LC++++++ii++  g
  Oeu055551.1 10 YIANDAERRASFRKRKKGIVNKINELCTLCNIQACIIIYGAYG 52
                 589************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MTRGKIKLEY IANDAERRAS FRKRKKGIVN KINELCTLCN IQACIIIYGA YGPQPTVWPS  60
RLDAQQIISK FWELPEVEQT QRLFNQESYT IQRVQKSRKQ AEKLQRINRI TDMEILMHQC  120
MAGLSSQQNV PLNDITEMGC LVEQNIQDIM ARMKELEKNR ATNLQMGETS STPPRDDAAG  180
PNFRELSLFH KL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-36M-type_MADS family protein