PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055808.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 360aa    MW: 39844.4 Da    PI: 8.7083
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055808.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.3e-12293338655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+      +  + +++L +Av+YIk+Lq
  Oeu055808.1 293 SIAERVRRTRISERMRKLQELVPNM----ERQTNTSDMLDLAVDYIKDLQ 338
                  689*********************6....4789****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MQQQVGSGLK RYRSAPSSYL TSLSDISSTS GGFEGDDFDQ IFNARVSSPE TQQIFERFMN  60
SVDTIGHNYS SNMSLQSQSQ SQFVQPIKNE TDVHQPQQQL QKQKSNDYSS ASQMTYQTHS  120
SGNASSSMDN SFSRLHGSIN SDRVAHMRMD GGVCSSNLIR QSSMPAGLFV NINIDNEFGA  180
MRSLGNFEAG NSGRAEALSS SASRFKNQMV YPSMQRSSLG MMIPISEIGS KSIGETRPDD  240
QNSEDGNRPT TLLSHHLSLP SSTAEMSAME KMWQESVPCK IRAKRGCATH PRSIAERVRR  300
TRISERMRKL QELVPNMERQ TNTSDMLDLA VDYIKDLQTQ VKTLSDKHAK CSCSAKLKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-54bHLH family protein